Search results for "reference sequence"

showing 2 items of 2 documents

Non-Redundant tRNA Reference Sequences for Deep Sequencing Analysis of tRNA Abundance and Epitranscriptomic RNA Modifications

2021

Analysis of RNA by deep-sequencing approaches has found widespread application in modern biology. In addition to measurements of RNA abundance under various physiological conditions, such techniques are now widely used for mapping and quantification of RNA modifications. Transfer RNA (tRNA) molecules are among the frequent targets of such investigation, since they contain multiple modified residues. However, the major challenge in tRNA examination is related to a large number of duplicated and point-mutated genes encoding those RNA molecules. Moreover, the existence of multiple isoacceptors/isodecoders complicates both the analysis and read mapping. Existing databases for tRNA sequencing pr…

0301 basic medicinelcsh:QH426-470ved/biology.organism_classification_rank.speciesComputational biologyBiology01 natural sciencesArticleDeep sequencingdeep sequencing03 medical and health sciencesRNA modificationsRNA Transferepitranscriptome[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Escherichia coliGeneticsModel organismtRNAGeneComputingMilieux_MISCELLANEOUSGenetics (clinical)Sequence Analysis RNA010405 organic chemistryved/biologyreference sequenceHigh-Throughput Nucleotide SequencingRNA[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyquantification0104 chemical scienceslcsh:GeneticsRNA Bacterial030104 developmental biologyTransfer RNADatabases Nucleic AcidtRNA poolBacillus subtilisReference genomeGenes
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mtDNA analysis of the human remains buried in the sarcophagus of Federico II

2005

Abstract The sarcophagus containing the remains of Federico II, located in the Cathedral of Palermo (Sicily, Italy), was opened on 1998 to perform a multidisciplinary survey [1]. Next to the remains of Federico II and in close contact with them were laying two other skeletons belonging, according to historical records, to Pietro II di Aragona and to an anonymous person (“The Third Individual”), probably a woman. The bones appeared severely deteriorated. Chemical analysis performed on bone samples excluded that the bodies underwent some kind of embalming process. The analysis of mtDNA from bone samples taken from the three skeletons was successful in only one of the two labs involved. The HV…

ArcheologyMitochondrial DNAMaterials Science (miscellaneous)Context (language use)ConservationBiologyArchaeologyGenealogyBiological materialsAncient DNAChemistry (miscellaneous)Cambridge Reference SequenceSarcophagusGeneral Economics Econometrics and FinanceClose contactSpectroscopySequence (medicine)PCR DNA fingerprinting mt DNA
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